51 lines
1.2 KiB
YAML
51 lines
1.2 KiB
YAML
name: CI
|
|
|
|
on:
|
|
push:
|
|
branches: [main, develop]
|
|
pull_request:
|
|
branches: [main, develop]
|
|
|
|
jobs:
|
|
lint:
|
|
name: Lint
|
|
runs-on: ubuntu-latest
|
|
steps:
|
|
- uses: actions/checkout@v4
|
|
- uses: actions/setup-python@v5
|
|
with:
|
|
python-version: '3.11'
|
|
- name: Install dependencies
|
|
run: |
|
|
python -m pip install --upgrade pip
|
|
pip install black ruff mypy types-requests
|
|
- name: Run Black
|
|
run: black --check .
|
|
- name: Run Ruff
|
|
run: ruff check .
|
|
- name: Run MyPy
|
|
run: mypy tcga_downloader
|
|
|
|
test:
|
|
name: Test
|
|
runs-on: ubuntu-latest
|
|
strategy:
|
|
matrix:
|
|
python-version: ['3.11', '3.12']
|
|
steps:
|
|
- uses: actions/checkout@v4
|
|
- uses: actions/setup-python@v5
|
|
with:
|
|
python-version: ${{ matrix.python-version }}
|
|
- name: Install dependencies
|
|
run: |
|
|
python -m pip install --upgrade pip
|
|
pip install -e ".[dev]"
|
|
- name: Run tests
|
|
run: pytest --cov=tcga_downloader --cov-report=xml --cov-report=term
|
|
- name: Upload coverage
|
|
uses: codecov/codecov-action@v4
|
|
if: matrix.python-version == '3.11'
|
|
with:
|
|
files: ./coverage.xml
|